Analysis of Ligand-Protein Contacts in PDB entry:
1LY8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 1LY8. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
500 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
BMA
A
600 11BETA-D-MANNOPYRANOSE
lig 3
MAN
A
700 11ALPHA-D-MANNOPYRANOSE
lig 4
CA
A
9001 1CALCIUM ION
lig 5
CA
A
9004 1CALCIUM ION
lig 6
HEM
A
344 43PROTOPORPHYRIN IX CONTAINING FE
lig 7
GOL
A
801 6GLYCEROL
lig 8
GOL
A
806 6GLYCEROL
lig 9
GOL
A
810 6GLYCEROL
lig 10
GOL
A
811 6GLYCEROL
lig 11
NAG
B
500 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
B
600 11BETA-D-MANNOPYRANOSE
lig 13
MAN
B
700 11ALPHA-D-MANNOPYRANOSE
lig 14
CA
B
9002 1CALCIUM ION
lig 15
CA
B
9003 1CALCIUM ION
lig 16
HEM
B
344 43PROTOPORPHYRIN IX CONTAINING FE
lig 17
GOL
B
800 6GLYCEROL
lig 18
GOL
B
802 6GLYCEROL
lig 19
GOL
B
803 6GLYCEROL
lig 20
GOL
B
804 6GLYCEROL
lig 21
GOL
B
805 6GLYCEROL
lig 22
GOL
B
807 6GLYCEROL
lig 23
GOL
B
808 6GLYCEROL
lig 24
GOL
B
809 6GLYCEROL