Analysis of Ligand-Protein Contacts in PDB entry:
1MKI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 7 ligands in PDB entry 1MKI. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
74 10PHOSPHOSERINE
lig 2
SEP
B
74 10PHOSPHOSERINE
lig 3
EDO
A
1302 41,2-ETHANEDIOL
lig 4
EDO
A
1303 41,2-ETHANEDIOL
lig 5
EDO
A
1305 41,2-ETHANEDIOL
lig 6
FMT
A
1301 3FORMIC ACID
lig 7
EDO
B
1304 41,2-ETHANEDIOL