Analysis of Ligand-Protein Contacts in PDB entry:
1NCD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 1NCD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
A
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
A
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
A
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
A
6 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
N
475 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
CA
N
0 1CALCIUM ION