Analysis of Ligand-Protein Contacts in PDB entry:
1ND6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 1ND6. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
MAN
E
3 12ALPHA-D-MANNOPYRANOSE
lig 4
MAN
E
4 12ALPHA-D-MANNOPYRANOSE
lig 5
NAG
F
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
F
2 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
G
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
G
2 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
MAN
G
3 12ALPHA-D-MANNOPYRANOSE
lig 10
MAN
G
4 12ALPHA-D-MANNOPYRANOSE
lig 11
MAN
G
5 12ALPHA-D-MANNOPYRANOSE
lig 12
NAG
H
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
H
2 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
MAN
H
3 12ALPHA-D-MANNOPYRANOSE
lig 15
NAG
I
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
I
2 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
MAN
I
3 12ALPHA-D-MANNOPYRANOSE
lig 18
MAN
I
4 12ALPHA-D-MANNOPYRANOSE
lig 19
MAN
I
5 12ALPHA-D-MANNOPYRANOSE
lig 20
PO4
A
401 5PHOSPHATE ION
lig 21
1PE
A
402 16PENTAETHYLENE GLYCOL
lig 22
NAG
B
1401 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
PO4
B
1402 5PHOSPHATE ION
lig 24
GLY
B
1403 5GLYCINE
lig 25
1PE
B
1404 16PENTAETHYLENE GLYCOL
lig 26
PO4
C
2401 5PHOSPHATE ION
lig 27
1PE
C
2402 16PENTAETHYLENE GLYCOL
lig 28
NAG
D
3401 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
PO4
D
3402 5PHOSPHATE ION
lig 30
1PE
D
3403 16PENTAETHYLENE GLYCOL