Analysis of Ligand-Protein Contacts in PDB entry:
1NKE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 1NKE. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GLC
D
1 11ALPHA-D-GLUCOPYRANOSE
lig 2
FRU
D
2 12BETA-D-FRUCTOFURANOSE
lig 3
GLC
E
1 11ALPHA-D-GLUCOPYRANOSE
lig 4
FRU
E
2 12BETA-D-FRUCTOFURANOSE
lig 5
DCP
A
2 282'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
lig 6
SO4
A
910 5SULFATE ION
lig 7
SO4
A
911 5SULFATE ION
lig 8
SO4
A
912 5SULFATE ION
lig 9
SO4
A
913 5SULFATE ION
lig 10
SO4
A
914 5SULFATE ION
lig 11
MG
A
920 1MAGNESIUM ION