Analysis of Ligand-Protein Contacts in PDB entry:
1NKZ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 27 ligands in PDB entry 1NKZ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CXM
A
1 11N-CARBOXYMETHIONINE
lig 2
CXM
C
1 11N-CARBOXYMETHIONINE
lig 3
CXM
E
1 11N-CARBOXYMETHIONINE
lig 4
RG1
A
404 52RHODOPIN B-D-GLUCOSIDE
lig 5
BOG
A
507 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 6
BCL
A
301 66BACTERIOCHLOROPHYLL A
lig 7
BCL
A
307 66BACTERIOCHLOROPHYLL A
lig 8
RG1
B
401 52RHODOPIN B-D-GLUCOSIDE
lig 9
BCL
B
302 66BACTERIOCHLOROPHYLL A
lig 10
RG1
C
403 52RHODOPIN B-D-GLUCOSIDE
lig 11
RG1
C
405 52RHODOPIN B-D-GLUCOSIDE
lig 12
BOG
C
504 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 13
BOG
C
508 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 14
BCL
C
303 66BACTERIOCHLOROPHYLL A
lig 15
BCL
C
308 66BACTERIOCHLOROPHYLL A
lig 16
BEN
C
510 9BENZAMIDINE
lig 17
RG1
D
402 52RHODOPIN B-D-GLUCOSIDE
lig 18
BCL
D
304 66BACTERIOCHLOROPHYLL A
lig 19
RG1
E
406 52RHODOPIN B-D-GLUCOSIDE
lig 20
BOG
E
505 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 21
BOG
E
506 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 22
BOG
E
509 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 23
BCL
E
305 66BACTERIOCHLOROPHYLL A
lig 24
BCL
E
309 66BACTERIOCHLOROPHYLL A
lig 25
BEN
E
511 9BENZAMIDINE
lig 26
BEN
E
512 9BENZAMIDINE
lig 27
BCL
F
306 66BACTERIOCHLOROPHYLL A