Analysis of Ligand-Protein Contacts in PDB entry:
1NMC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 1NMC. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
D
6 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 10
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
E
6 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
N
475 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
N
476 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
N
477 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
CA
N
478 1CALCIUM ION
lig 17
MAN
A
475 11ALPHA-D-MANNOPYRANOSE
lig 18
NAG
A
476 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
A
477 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
CA
A
478 1CALCIUM ION