Analysis of Ligand-Protein Contacts in PDB entry:
1NVM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 1NVM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MN
A
3504 1MANGANESE (II) ION
lig 2
OXL
A
3508 6OXALATE ION
lig 3
SO4
A
3512 5SULFATE ION
lig 4
SO4
A
3513 5SULFATE ION
lig 5
MPD
A
3525 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 6
NAD
B
3501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 7
MPD
B
3528 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 8
MN
C
3505 1MANGANESE (II) ION
lig 9
OXL
C
3509 6OXALATE ION
lig 10
SO4
C
3514 5SULFATE ION
lig 11
SO4
C
3515 5SULFATE ION
lig 12
SO4
C
3516 5SULFATE ION
lig 13
MPD
C
3524 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 14
MPD
C
3529 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 15
NAD
D
3502 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 16
MN
E
3506 1MANGANESE (II) ION
lig 17
OXL
E
3510 6OXALATE ION
lig 18
SO4
E
3517 5SULFATE ION
lig 19
SO4
E
3518 5SULFATE ION
lig 20
SO4
E
3522 5SULFATE ION
lig 21
MPD
E
3527 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 22
SO4
F
3519 5SULFATE ION
lig 23
SO4
F
3523 5SULFATE ION
lig 24
MN
G
3507 1MANGANESE (II) ION
lig 25
OXL
G
3511 6OXALATE ION
lig 26
SO4
G
3520 5SULFATE ION
lig 27
SO4
G
3521 5SULFATE ION
lig 28
MPD
G
3526 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 29
NAD
H
3503 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE