Analysis of Ligand-Protein Contacts in PDB entry:
1P8J


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 131 ligands in PDB entry 1P8J. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DKA
J
801 11DECANOIC ACID
lig 2
AR7
J
805 11 DIHYDROXYPENTYL]AMINO}METHANIMINIUM
lig 3
0QE
J
806 1CHLOROMETHANE
lig 4
DKA
K
801 11DECANOIC ACID
lig 5
AR7
K
805 11 DIHYDROXYPENTYL]AMINO}METHANIMINIUM
lig 6
0QE
K
806 1CHLOROMETHANE
lig 7
DKA
L
801 11DECANOIC ACID
lig 8
AR7
L
805 11 DIHYDROXYPENTYL]AMINO}METHANIMINIUM
lig 9
0QE
L
806 1CHLOROMETHANE
lig 10
DKA
M
801 11DECANOIC ACID
lig 11
AR7
M
805 11 DIHYDROXYPENTYL]AMINO}METHANIMINIUM
lig 12
0QE
M
806 1CHLOROMETHANE
lig 13
DKA
N
801 11DECANOIC ACID
lig 14
AR7
N
805 11 DIHYDROXYPENTYL]AMINO}METHANIMINIUM
lig 15
0QE
N
806 1CHLOROMETHANE
lig 16
DKA
P
801 11DECANOIC ACID
lig 17
AR7
P
805 11 DIHYDROXYPENTYL]AMINO}METHANIMINIUM
lig 18
0QE
P
806 1CHLOROMETHANE
lig 19
DKA
Q
801 11DECANOIC ACID
lig 20
AR7
Q
805 11 DIHYDROXYPENTYL]AMINO}METHANIMINIUM
lig 21
0QE
Q
806 1CHLOROMETHANE
lig 22
DKA
R
801 11DECANOIC ACID
lig 23
AR7
R
805 11 DIHYDROXYPENTYL]AMINO}METHANIMINIUM
lig 24
0QE
R
806 1CHLOROMETHANE
lig 25
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 28
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 29
NAG
I
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
GAL
I
6 11BETA-D-GALACTOPYRANOSE
lig 31
NAG
I
7 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
GAL
I
8 11BETA-D-GALACTOPYRANOSE
lig 33
MAN
I
9 11ALPHA-D-MANNOPYRANOSE
lig 34
NAG
I
10 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
FUL
I
11 10BETA-L-FUCOPYRANOSE
lig 36
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 39
FUC
O
4 10ALPHA-L-FUCOPYRANOSE
lig 40
NAG
A
901 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
CA
A
3001 1CALCIUM ION
lig 42
CA
A
3002 1CALCIUM ION
lig 43
SO4
A
4004 5SULFATE ION
lig 44
SO4
A
4005 5SULFATE ION
lig 45
SO4
A
4014 5SULFATE ION
lig 46
SO4
A
4025 5SULFATE ION
lig 47
SO4
A
4028 5SULFATE ION
lig 48
SO4
A
4054 5SULFATE ION
lig 49
SO4
A
4055 5SULFATE ION
lig 50
SO4
A
4061 5SULFATE ION
lig 51
SO4
A
4064 5SULFATE ION
lig 52
SO4
A
4066 5SULFATE ION
lig 53
SO4
A
4069 5SULFATE ION
lig 54
NAG
B
901 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
CA
B
3003 1CALCIUM ION
lig 56
CA
B
3004 1CALCIUM ION
lig 57
SO4
B
4021 5SULFATE ION
lig 58
SO4
B
4022 5SULFATE ION
lig 59
SO4
B
4023 5SULFATE ION
lig 60
SO4
B
4026 5SULFATE ION
lig 61
SO4
B
4027 5SULFATE ION
lig 62
SO4
B
4050 5SULFATE ION
lig 63
CA
C
3005 1CALCIUM ION
lig 64
CA
C
3006 1CALCIUM ION
lig 65
SO4
C
4007 5SULFATE ION
lig 66
SO4
C
4008 5SULFATE ION
lig 67
SO4
C
4010 5SULFATE ION
lig 68
SO4
C
4013 5SULFATE ION
lig 69
SO4
C
4058 5SULFATE ION
lig 70
SO4
C
4059 5SULFATE ION
lig 71
CA
D
3007 1CALCIUM ION
lig 72
CA
D
3008 1CALCIUM ION
lig 73
SO4
D
4011 5SULFATE ION
lig 74
SO4
D
4012 5SULFATE ION
lig 75
SO4
D
4015 5SULFATE ION
lig 76
SO4
D
4016 5SULFATE ION
lig 77
SO4
D
4018 5SULFATE ION
lig 78
SO4
D
4019 5SULFATE ION
lig 79
SO4
D
4020 5SULFATE ION
lig 80
SO4
D
4063 5SULFATE ION
lig 81
SO4
D
4065 5SULFATE ION
lig 82
NAG
E
901 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 83
CA
E
3009 1CALCIUM ION
lig 84
CA
E
3010 1CALCIUM ION
lig 85
SO4
E
4037 5SULFATE ION
lig 86
SO4
E
4038 5SULFATE ION
lig 87
SO4
E
4039 5SULFATE ION
lig 88
SO4
E
4040 5SULFATE ION
lig 89
SO4
E
4041 5SULFATE ION
lig 90
SO4
E
4046 5SULFATE ION
lig 91
SO4
E
4049 5SULFATE ION
lig 92
SO4
E
4060 5SULFATE ION
lig 93
SO4
E
4062 5SULFATE ION
lig 94
NAG
F
901 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 95
NAG
F
951 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 96
CA
F
3011 1CALCIUM ION
lig 97
CA
F
3012 1CALCIUM ION
lig 98
SO4
F
4002 5SULFATE ION
lig 99
SO4
F
4003 5SULFATE ION
lig 100
SO4
F
4036 5SULFATE ION
lig 101
SO4
F
4051 5SULFATE ION
lig 102
SO4
F
4056 5SULFATE ION
lig 103
SO4
F
4057 5SULFATE ION
lig 104
SO4
F
4067 5SULFATE ION
lig 105
SO4
F
4068 5SULFATE ION
lig 106
SO4
F
4070 5SULFATE ION
lig 107
CA
G
3013 1CALCIUM ION
lig 108
CA
G
3014 1CALCIUM ION
lig 109
SO4
G
4029 5SULFATE ION
lig 110
SO4
G
4030 5SULFATE ION
lig 111
SO4
G
4031 5SULFATE ION
lig 112
SO4
G
4032 5SULFATE ION
lig 113
SO4
G
4034 5SULFATE ION
lig 114
SO4
G
4035 5SULFATE ION
lig 115
NAG
H
901 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 116
CA
H
3015 1CALCIUM ION
lig 117
CA
H
3016 1CALCIUM ION
lig 118
SO4
H
4042 5SULFATE ION
lig 119
SO4
H
4043 5SULFATE ION
lig 120
SO4
H
4044 5SULFATE ION
lig 121
SO4
H
4045 5SULFATE ION
lig 122
SO4
H
4047 5SULFATE ION
lig 123
SO4
H
4048 5SULFATE ION
lig 124
SO4
J
4001 5SULFATE ION
lig 125
SO4
K
4024 5SULFATE ION
lig 126
SO4
L
4009 5SULFATE ION
lig 127
SO4
M
4017 5SULFATE ION
lig 128
SO4
N
4006 5SULFATE ION
lig 129
SO4
P
4052 5SULFATE ION
lig 130
SO4
Q
4033 5SULFATE ION
lig 131
SO4
R
4053 5SULFATE ION