Analysis of Ligand-Protein Contacts in PDB entry:
1PJ4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 1PJ4. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MLT
A
701 9D-MALATE
lig 2
MN
A
4604 1MANGANESE (II) ION
lig 3
ATP
A
4601 31ADENOSINE-5'-TRIPHOSPHATE
lig 4
ATP
A
4602 31ADENOSINE-5'-TRIPHOSPHATE
lig 5
FUM
A
700 8FUMARIC ACID
lig 6
MLT
B
1701 9D-MALATE
lig 7
MN
B
1604 1MANGANESE (II) ION
lig 8
ATP
B
1601 31ADENOSINE-5'-TRIPHOSPHATE
lig 9
ATP
B
1602 31ADENOSINE-5'-TRIPHOSPHATE
lig 10
FUM
B
1700 8FUMARIC ACID
lig 11
MLT
C
2701 9D-MALATE
lig 12
MN
C
2604 1MANGANESE (II) ION
lig 13
ATP
C
2601 31ADENOSINE-5'-TRIPHOSPHATE
lig 14
ATP
C
2602 31ADENOSINE-5'-TRIPHOSPHATE
lig 15
FUM
C
2700 8FUMARIC ACID
lig 16
MLT
D
3701 9D-MALATE
lig 17
MN
D
3604 1MANGANESE (II) ION
lig 18
ATP
D
3601 31ADENOSINE-5'-TRIPHOSPHATE
lig 19
ATP
D
3602 31ADENOSINE-5'-TRIPHOSPHATE
lig 20
FUM
D
3700 8FUMARIC ACID