Analysis of Ligand-Protein Contacts in PDB entry:
1PJS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 9 ligands in PDB entry 1PJS. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
128 10PHOSPHOSERINE
lig 2
SEP
B
128 10PHOSPHOSERINE
lig 3
SAH
A
501 26S-ADENOSYL-L-HOMOCYSTEINE
lig 4
NAD
A
502 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 5
PGE
A
505 10TRIETHYLENE GLYCOL
lig 6
PGE
A
506 10TRIETHYLENE GLYCOL
lig 7
PO4
B
507 5PHOSPHATE ION
lig 8
SAH
B
503 26S-ADENOSYL-L-HOMOCYSTEINE
lig 9
NAD
B
504 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE