Analysis of Ligand-Protein Contacts in PDB entry:
1PMM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 1PMM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PLP
A
500 15PYRIDOXAL-5'-PHOSPHATE
lig 2
ACY
A
5518 4ACETIC ACID
lig 3
PLP
B
500 15PYRIDOXAL-5'-PHOSPHATE
lig 4
ACY
B
6518 4ACETIC ACID
lig 5
PLP
C
501 15PYRIDOXAL-5'-PHOSPHATE
lig 6
ACY
C
8518 4ACETIC ACID
lig 7
PLP
D
501 15PYRIDOXAL-5'-PHOSPHATE
lig 8
ACY
D
7518 4ACETIC ACID
lig 9
PLP
E
502 15PYRIDOXAL-5'-PHOSPHATE
lig 10
ACY
E
9518 4ACETIC ACID
lig 11
ACY
E
9519 4ACETIC ACID
lig 12
PLP
F
502 15PYRIDOXAL-5'-PHOSPHATE