Analysis of Ligand-Protein Contacts in PDB entry:
1Q8S


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 1Q8S. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PCA
A
1 8PYROGLUTAMIC ACID
lig 2
PCA
B
1 8PYROGLUTAMIC ACID
lig 3
MMA
C
1 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 4
MAN
C
2 11ALPHA-D-MANNOPYRANOSE
lig 5
MMA
D
1 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 6
MAN
D
2 11ALPHA-D-MANNOPYRANOSE
lig 7
MN
A
271 1MANGANESE (II) ION
lig 8
CA
A
272 1CALCIUM ION
lig 9
MN
B
273 1MANGANESE (II) ION
lig 10
CA
B
274 1CALCIUM ION