Analysis of Ligand-Protein Contacts in PDB entry:
1QF3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 1QF3. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MBG
A
439 13METHYL BETA-D-GALACTOPYRANOSIDE
lig 2
CA
A
437 1CALCIUM ION
lig 3
MN
A
238 1MANGANESE (II) ION
lig 4
MBG
B
440 13METHYL BETA-D-GALACTOPYRANOSIDE
lig 5
CA
B
237 1CALCIUM ION
lig 6
MN
B
238 1MANGANESE (II) ION
lig 7
MBG
C
441 13METHYL BETA-D-GALACTOPYRANOSIDE
lig 8
CA
C
237 1CALCIUM ION
lig 9
MN
C
238 1MANGANESE (II) ION
lig 10
MBG
D
442 13METHYL BETA-D-GALACTOPYRANOSIDE
lig 11
CA
D
237 1CALCIUM ION
lig 12
MN
D
238 1MANGANESE (II) ION