Analysis of Ligand-Protein Contacts in PDB entry:
1QFF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 1QFF. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PA1
B
1 112-AMINO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 2
GCN
B
2 102-AMINO-2,3-DIDEOXY-ALPHA-D-GLUCOYRANOSE
lig 3
KDO
B
3 153-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANOSONIC
lig 4
GMH
B
4 13L-GLYCERO-ALPHA-D-MANNO-HEPTOPYRANOSE
lig 5
GMH
B
5 13L-GLYCERO-ALPHA-D-MANNO-HEPTOPYRANOSE
lig 6
GLC
B
6 11ALPHA-D-GLUCOPYRANOSE
lig 7
GLC
B
7 11ALPHA-D-GLUCOPYRANOSE
lig 8
GLA
B
8 11ALPHA-D-GALACTOPYRANOSE
lig 9
KDO
B
9 153-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANOSONIC
lig 10
PO4
A
2001 4PHOSPHATE ION
lig 11
PO4
A
2005 4PHOSPHATE ION
lig 12
FTT
A
1009 163-HYDROXY-TETRADECANOIC ACID
lig 13
FTT
A
1010 73-HYDROXY-TETRADECANOIC ACID
lig 14
FTT
A
1011 163-HYDROXY-TETRADECANOIC ACID
lig 15
DAO
A
1012 13LAURIC ACID
lig 16
FTT
A
1013 173-HYDROXY-TETRADECANOIC ACID
lig 17
MYR
A
1014 15MYRISTIC ACID
lig 18
DPO
A
2000 8DIPHOSPHATE
lig 19
EAP
A
2004 72-AMINO-VINYL-PHOSPHATE
lig 20
FCI
A
1050 51FERRICROCIN-IRON
lig 21
DDQ
A
1101 14DECYLAMINE-N,N-DIMETHYL-N-OXIDE
lig 22
DDQ
A
1102 14DECYLAMINE-N,N-DIMETHYL-N-OXIDE