Analysis of Ligand-Protein Contacts in PDB entry:
1QPA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 1QPA. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
HTR
A
171 15BETA-HYDROXYTRYPTOPHANE
lig 2
HTR
B
171 15BETA-HYDROXYTRYPTOPHANE
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
FUC
C
3 10ALPHA-L-FUCOPYRANOSE
lig 6
MAN
D
1 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
D
2 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
A
360 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
MAN
A
370 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
A
375 11ALPHA-D-MANNOPYRANOSE
lig 11
CA
A
351 1CALCIUM ION
lig 12
CA
A
352 1CALCIUM ION
lig 13
HEM
A
350 43PROTOPORPHYRIN IX CONTAINING FE
lig 14
MAN
B
370 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
B
375 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
B
380 11ALPHA-D-MANNOPYRANOSE
lig 17
CA
B
351 1CALCIUM ION
lig 18
CA
B
352 1CALCIUM ION
lig 19
HEM
B
350 43PROTOPORPHYRIN IX CONTAINING FE