Analysis of Ligand-Protein Contacts in PDB entry:
1R4P


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 1R4P. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NA
A
4001 1SODIUM ION
lig 2
NA
A
4002 1SODIUM ION
lig 3
NA
A
4003 1SODIUM ION
lig 4
EDO
A
2003 41,2-ETHANEDIOL
lig 5
EDO
A
2004 41,2-ETHANEDIOL
lig 6
FMT
A
3001 3FORMIC ACID
lig 7
FMT
A
3004 3FORMIC ACID
lig 8
FMT
A
3009 3FORMIC ACID
lig 9
FMT
A
3010 3FORMIC ACID
lig 10
FMT
A
3013 3FORMIC ACID
lig 11
FMT
A
3015 3FORMIC ACID
lig 12
NA
B
4005 1SODIUM ION
lig 13
1PS
B
1002 133-PYRIDINIUM-1-YLPROPANE-1-SULFONATE
lig 14
FMT
B
3006 3FORMIC ACID
lig 15
1PS
C
1003 133-PYRIDINIUM-1-YLPROPANE-1-SULFONATE
lig 16
FMT
C
3007 3FORMIC ACID
lig 17
FMT
C
3012 3FORMIC ACID
lig 18
1PS
D
1004 133-PYRIDINIUM-1-YLPROPANE-1-SULFONATE
lig 19
EDO
D
2002 41,2-ETHANEDIOL
lig 20
FMT
D
3003 3FORMIC ACID
lig 21
FMT
E
3002 3FORMIC ACID
lig 22
FMT
E
3008 3FORMIC ACID
lig 23
FMT
E
3014 3FORMIC ACID
lig 24
NA
F
4004 1SODIUM ION
lig 25
1PS
F
1001 133-PYRIDINIUM-1-YLPROPANE-1-SULFONATE
lig 26
EDO
F
2001 41,2-ETHANEDIOL
lig 27
EDO
F
2005 41,2-ETHANEDIOL
lig 28
FMT
F
3005 3FORMIC ACID
lig 29
FMT
F
3011 3FORMIC ACID