Analysis of Ligand-Protein Contacts in PDB entry:
1RDJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 1RDJ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MFB
1
1 11METHYL BETA-L-FUCOPYRANOSIDE
lig 2
CA
1
227 1CALCIUM ION
lig 3
CA
1
2 1CALCIUM ION
lig 4
CL
1
3 1CHLORIDE ION
lig 5
MFB
2
1 11METHYL BETA-L-FUCOPYRANOSIDE
lig 6
CA
2
227 1CALCIUM ION
lig 7
CA
2
2 1CALCIUM ION