Analysis of Ligand-Protein Contacts in PDB entry:
1RDM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 8 ligands in PDB entry 1RDM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MMA
1
1 12METHYL ALPHA-D-MANNOPYRANOSIDE
lig 2
MMA
1
2 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 3
CA
1
227 1CALCIUM ION
lig 4
CA
1
228 1CALCIUM ION
lig 5
CL
1
3 1CHLORIDE ION
lig 6
MMA
2
1 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 7
CA
2
227 1CALCIUM ION
lig 8
CA
2
2 1CALCIUM ION