Analysis of Ligand-Protein Contacts in PDB entry:
1RKY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 1RKY. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPQ
A
478 145-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-B
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 5
NAG
A
1081 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
A
1191 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
A
1309 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
A
1434 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
CU
A
801 1COPPER (II) ION
lig 10
CA
A
802 1CALCIUM ION
lig 11
CA
A
803 1CALCIUM ION
lig 12
MG
A
804 1MAGNESIUM ION
lig 13
MG
A
805 1MAGNESIUM ION
lig 14
MG
A
806 1MAGNESIUM ION
lig 15
CL
A
811 1CHLORIDE ION
lig 16
CL
A
812 1CHLORIDE ION
lig 17
CL
A
813 1CHLORIDE ION
lig 18
CL
A
814 1CHLORIDE ION
lig 19
CL
A
815 1CHLORIDE ION
lig 20
CL
A
816 1CHLORIDE ION
lig 21
IMD
A
821 5IMIDAZOLE
lig 22
XE
A
901 1XENON
lig 23
XE
A
902 1XENON
lig 24
XE
A
903 1XENON
lig 25
XE
A
904 1XENON
lig 26
XE
A
905 1XENON
lig 27
XE
A
906 1XENON
lig 28
XE
A
907 1XENON
lig 29
XE
A
908 1XENON