Analysis of Ligand-Protein Contacts in PDB entry:
1RYD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 1RYD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACT
A
604 4ACETATE ION
lig 2
ACT
A
605 4ACETATE ION
lig 3
NDP
A
700 48 PHOSPHATE
lig 4
GLC
B
601 11ALPHA-D-GLUCOPYRANOSE
lig 5
ACT
B
603 4ACETATE ION
lig 6
NDP
B
701 48 PHOSPHATE
lig 7
BME
B
602 4BETA-MERCAPTOETHANOL