Analysis of Ligand-Protein Contacts in PDB entry:
1SED


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 1SED. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ZN
A
501 1ZINC ION
lig 2
NA
A
504 1SODIUM ION
lig 3
MPD
A
701 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 4
MPD
A
702 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 5
MPD
A
703 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 6
MPD
A
712 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 7
MPD
A
714 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 8
MPD
A
715 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 9
GOL
A
801 6GLYCEROL
lig 10
GOL
A
802 6GLYCEROL
lig 11
ZN
B
502 1ZINC ION
lig 12
NA
B
505 1SODIUM ION
lig 13
MPD
B
704 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 14
MPD
B
705 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 15
MPD
B
706 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 16
MPD
B
713 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 17
MPD
B
716 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 18
GOL
B
803 6GLYCEROL
lig 19
GOL
B
804 6GLYCEROL
lig 20
ZN
C
503 1ZINC ION
lig 21
NA
C
506 1SODIUM ION
lig 22
MPD
C
707 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 23
MPD
C
708 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 24
MPD
C
709 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 25
MPD
C
710 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 26
MPD
C
711 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 27
MPD
C
717 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 28
GOL
C
805 6GLYCEROL
lig 29
GOL
C
806 6GLYCEROL