Analysis of Ligand-Protein Contacts in PDB entry:
1SMC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 1SMC. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
DUT
A
2170 28DEOXYURIDINE-5'-TRIPHOSPHATE
lig 2
TRS
A
2171 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 3
TRS
B
155 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 4
NO3
C
155 4NITRATE ION
lig 5
DUT
C
1170 28DEOXYURIDINE-5'-TRIPHOSPHATE
lig 6
DUT
C
3170 28DEOXYURIDINE-5'-TRIPHOSPHATE
lig 7
TRS
C
3171 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL