Analysis of Ligand-Protein Contacts in PDB entry:
1SR5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 1SR5. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
YYB
D
1 201,5-ANHYDRO-3-O-METHYL-2,6-DI-O-SULFO-D-GL
lig 2
U9J
D
2 14 DIMETHOXYTETRAHYDRO-2H-PYRAN-2,5-DIOL
lig 3
GU6
D
3 232,3,6-TRI-O-SULFO-ALPHA-D-GLUCOPYRANOSE
lig 4
U9M
D
4 14 DIMETHOXYTETRAHYDRO-2H-PYRAN-2,5-DIOL
lig 5
U9G
D
5 172,3-DI-O-METHYL-6-O-SULFO-ALPHA-D-GLUCOPYR
lig 6
GU8
D
6 122,3,6-TRI-O-METHYL-BETA-D-GLUCOPYRANOSE
lig 7
U9D
D
7 114-DEOXY-2,3,6-TRI-O-METHYL-ALPHA-D-XYLO-HE
lig 8
NAG
A
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
A
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
C
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
GU4
C
602 132,3,4,6-TETRA-O-SULFONATO-ALPHA-D-GLUCOPYR