Analysis of Ligand-Protein Contacts in PDB entry:
1TKD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 1TKD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
DOC
P
822 182',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE
lig 2
8OG
T
855 238-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE
lig 3
MG
A
901 1MAGNESIUM ION
lig 4
MG
A
902 1MAGNESIUM ION
lig 5
MG
A
903 1MAGNESIUM ION
lig 6
SO4
A
904 5SULFATE ION
lig 7
SO4
A
905 5SULFATE ION
lig 8
SO4
A
906 5SULFATE ION
lig 9
D3T
A
823 282',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE
lig 10
MES
A
991 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 11
1PE
A
992 16PENTAETHYLENE GLYCOL