Analysis of Ligand-Protein Contacts in PDB entry:
1UBM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 1UBM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SF4
S
1001 8IRON/SULFUR CLUSTER
lig 2
SF4
S
1002 8IRON/SULFUR CLUSTER
lig 3
F3S
S
1003 7FE3-S4 CLUSTER
lig 4
MPD
S
2001 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 5
MPD
S
2004 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 6
MPD
S
2007 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 7
MG
L
1005 1MAGNESIUM ION
lig 8
FNE
L
1004 8 S)NICKEL(II)](FE-NI)
lig 9
MPD
L
2006 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 10
MPD
L
2010 8(4S)-2-METHYL-2,4-PENTANEDIOL