Analysis of Ligand-Protein Contacts in PDB entry:
1UPM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 1UPM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
KCX
B
201 12LYSINE NZ-CARBOXYLIC ACID
lig 2
KCX
E
201 12LYSINE NZ-CARBOXYLIC ACID
lig 3
KCX
H
201 12LYSINE NZ-CARBOXYLIC ACID
lig 4
KCX
K
201 12LYSINE NZ-CARBOXYLIC ACID
lig 5
KCX
L
201 12LYSINE NZ-CARBOXYLIC ACID
lig 6
KCX
O
201 12LYSINE NZ-CARBOXYLIC ACID
lig 7
KCX
R
201 12LYSINE NZ-CARBOXYLIC ACID
lig 8
KCX
V
201 12LYSINE NZ-CARBOXYLIC ACID
lig 9
CA
B
476 1CALCIUM ION
lig 10
CAP
B
477 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 11
CA
E
476 1CALCIUM ION
lig 12
CAP
E
477 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 13
CA
H
476 1CALCIUM ION
lig 14
CAP
H
477 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 15
CA
K
476 1CALCIUM ION
lig 16
CAP
K
477 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 17
CA
L
476 1CALCIUM ION
lig 18
CAP
L
477 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 19
CA
O
476 1CALCIUM ION
lig 20
CAP
O
477 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 21
CA
R
476 1CALCIUM ION
lig 22
CAP
R
477 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 23
CA
V
476 1CALCIUM ION
lig 24
CAP
V
477 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE