Analysis of Ligand-Protein Contacts in PDB entry:
1VAM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 1VAM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PNA
A
240 214-NITROPHENYL ALPHA-D-MANNOPYRANOSIDE
lig 2
MN
A
238 1MANGANESE (II) ION
lig 3
CA
A
239 1CALCIUM ION
lig 4
PNA
B
240 214-NITROPHENYL ALPHA-D-MANNOPYRANOSIDE
lig 5
MN
B
238 1MANGANESE (II) ION
lig 6
CA
B
239 1CALCIUM ION
lig 7
PNA
C
240 214-NITROPHENYL ALPHA-D-MANNOPYRANOSIDE
lig 8
MN
C
238 1MANGANESE (II) ION
lig 9
CA
C
239 1CALCIUM ION
lig 10
PNA
D
240 214-NITROPHENYL ALPHA-D-MANNOPYRANOSIDE
lig 11
MN
D
238 1MANGANESE (II) ION
lig 12
CA
D
239 1CALCIUM ION