Analysis of Ligand-Protein Contacts in PDB entry:
1VBI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 8 ligands in PDB entry 1VBI. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SO4
A
406 5SULFATE ION
lig 2
SO4
A
407 5SULFATE ION
lig 3
SO4
A
408 5SULFATE ION
lig 4
NAD
A
401 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 5
EDO
A
402 41,2-ETHANEDIOL
lig 6
EDO
A
403 41,2-ETHANEDIOL
lig 7
EDO
A
404 41,2-ETHANEDIOL
lig 8
EDO
A
405 41,2-ETHANEDIOL