Analysis of Ligand-Protein Contacts in PDB entry:
1VBR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 1VBR. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
XYP
C
1 10BETA-D-XYLOPYRANOSE
lig 2
XYS
C
2 9ALPHA-D-XYLOPYRANOSE
lig 3
XYP
D
1 10BETA-D-XYLOPYRANOSE
lig 4
XYS
D
2 9ALPHA-D-XYLOPYRANOSE
lig 5
ACY
A
842 4ACETIC ACID
lig 6
ACY
A
3 4ACETIC ACID
lig 7
ACY
A
5 4ACETIC ACID
lig 8
ACY
A
6 4ACETIC ACID
lig 9
ACY
B
2 4ACETIC ACID
lig 10
ACY
B
842 4ACETIC ACID