Analysis of Ligand-Protein Contacts in PDB entry:
1VCL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 1VCL. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PCA
A
1 8PYROGLUTAMIC ACID
lig 2
PCA
B
1 8PYROGLUTAMIC ACID
lig 3
CA
A
1001 1CALCIUM ION
lig 4
CA
A
1002 1CALCIUM ION
lig 5
CA
A
1003 1CALCIUM ION
lig 6
CA
A
1004 1CALCIUM ION
lig 7
CA
A
1005 1CALCIUM ION
lig 8
MG
A
1101 1MAGNESIUM ION
lig 9
MG
A
1102 1MAGNESIUM ION
lig 10
CL
A
1201 1CHLORIDE ION
lig 11
BTB
A
1301 14 PROPANE-1,3-DIOL
lig 12
CA
B
1001 1CALCIUM ION
lig 13
CA
B
1002 1CALCIUM ION
lig 14
CA
B
1003 1CALCIUM ION
lig 15
CA
B
1004 1CALCIUM ION
lig 16
CA
B
1005 1CALCIUM ION
lig 17
MG
B
1101 1MAGNESIUM ION
lig 18
MG
B
1102 1MAGNESIUM ION
lig 19
CL
B
2201 1CHLORIDE ION