Analysis of Ligand-Protein Contacts in PDB entry:
1VGO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 1VGO. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
BNG
A
301 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 2
BNG
A
302 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 3
BNG
A
303 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 4
BNG
A
304 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 5
BNG
A
305 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 6
BNG
A
306 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 7
BNG
A
307 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 8
BNG
A
308 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 9
BNG
A
309 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 10
SO4
A
400 5SULFATE ION
lig 11
RET
A
260 20RETINAL
lig 12
BNG
B
310 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 13
BNG
B
311 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 14
BNG
B
312 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 15
SO4
B
401 5SULFATE ION
lig 16
SO4
B
402 5SULFATE ION
lig 17
RET
B
261 20RETINAL