Analysis of Ligand-Protein Contacts in PDB entry:
1VMF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 1VMF. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NA
A
134 1SODIUM ION
lig 2
ACT
A
135 4ACETATE ION
lig 3
ACT
B
134 4ACETATE ION
lig 4
EDO
B
135 41,2-ETHANEDIOL
lig 5
EDO
C
134 41,2-ETHANEDIOL
lig 6
EPE
C
135 154-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 7
EDO
C
136 41,2-ETHANEDIOL