Analysis of Ligand-Protein Contacts in PDB entry:
1VP4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 37 ligands in PDB entry 1VP4. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PLP
A
501 15PYRIDOXAL-5'-PHOSPHATE
lig 2
UNL
A
601 5UNKNOWN LIGAND
lig 3
EDO
A
602 41,2-ETHANEDIOL
lig 4
EDO
A
603 41,2-ETHANEDIOL
lig 5
EDO
A
604 41,2-ETHANEDIOL
lig 6
FMT
A
605 3FORMIC ACID
lig 7
FMT
A
606 3FORMIC ACID
lig 8
FMT
A
607 3FORMIC ACID
lig 9
FMT
A
608 3FORMIC ACID
lig 10
FMT
A
609 3FORMIC ACID
lig 11
FMT
A
610 3FORMIC ACID
lig 12
FMT
A
611 3FORMIC ACID
lig 13
FMT
A
612 3FORMIC ACID
lig 14
FMT
A
613 3FORMIC ACID
lig 15
FMT
A
614 3FORMIC ACID
lig 16
FMT
A
615 3FORMIC ACID
lig 17
FMT
A
616 3FORMIC ACID
lig 18
FMT
A
617 3FORMIC ACID
lig 19
FMT
A
618 3FORMIC ACID
lig 20
FMT
A
619 3FORMIC ACID
lig 21
FMT
A
620 3FORMIC ACID
lig 22
FMT
A
621 3FORMIC ACID
lig 23
FMT
A
622 3FORMIC ACID
lig 24
PLP
B
501 15PYRIDOXAL-5'-PHOSPHATE
lig 25
UNL
B
601 8UNKNOWN LIGAND
lig 26
EDO
B
602 41,2-ETHANEDIOL
lig 27
EDO
B
603 41,2-ETHANEDIOL
lig 28
EDO
B
604 41,2-ETHANEDIOL
lig 29
FMT
B
605 3FORMIC ACID
lig 30
FMT
B
606 3FORMIC ACID
lig 31
FMT
B
607 3FORMIC ACID
lig 32
FMT
B
608 3FORMIC ACID
lig 33
FMT
B
609 3FORMIC ACID
lig 34
FMT
B
610 3FORMIC ACID
lig 35
FMT
B
611 3FORMIC ACID
lig 36
FMT
B
612 3FORMIC ACID
lig 37
FMT
B
613 3FORMIC ACID