Analysis of Ligand-Protein Contacts in PDB entry:
1Y39


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 1Y39. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GTP
C
101 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
GTP
D
301 32GUANOSINE-5'-TRIPHOSPHATE
lig 3
3CO
C
402 1COBALT (III) ION
lig 4
K
C
404 1POTASSIUM ION
lig 5
MG
C
405 1MAGNESIUM ION
lig 6
MG
C
407 1MAGNESIUM ION
lig 7
MG
C
408 1MAGNESIUM ION
lig 8
MG
C
409 1MAGNESIUM ION
lig 9
MG
C
415 1MAGNESIUM ION
lig 10
MG
C
416 1MAGNESIUM ION
lig 11
MG
C
417 1MAGNESIUM ION
lig 12
MG
C
419 1MAGNESIUM ION
lig 13
MG
C
420 1MAGNESIUM ION
lig 14
MG
C
421 1MAGNESIUM ION
lig 15
GOL
C
705 6GLYCEROL
lig 16
3CO
D
401 1COBALT (III) ION
lig 17
K
D
403 1POTASSIUM ION
lig 18
MG
D
406 1MAGNESIUM ION
lig 19
MG
D
410 1MAGNESIUM ION
lig 20
MG
D
411 1MAGNESIUM ION
lig 21
MG
D
412 1MAGNESIUM ION
lig 22
MG
D
413 1MAGNESIUM ION
lig 23
MG
D
414 1MAGNESIUM ION
lig 24
MG
D
418 1MAGNESIUM ION
lig 25
MG
D
422 1MAGNESIUM ION
lig 26
GOL
D
704 6GLYCEROL