Analysis of Ligand-Protein Contacts in PDB entry:
1Y5L


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 1Y5L. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
C
1 10N-FORMYLMETHIONINE
lig 2
MD1
A
1800 47 ESTER GUANYLATE ESTER
lig 3
MD1
A
2800 47 ESTER GUANYLATE ESTER
lig 4
6MO
A
3800 1MOLYBDENUM(VI) ION
lig 5
SF4
A
1801 8IRON/SULFUR CLUSTER
lig 6
3PH
A
1309 271,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 7
SF4
B
1802 8IRON/SULFUR CLUSTER
lig 8
SF4
B
1803 8IRON/SULFUR CLUSTER
lig 9
SF4
B
1804 8IRON/SULFUR CLUSTER
lig 10
F3S
B
1805 7FE3-S4 CLUSTER
lig 11
HEM
C
806 43PROTOPORPHYRIN IX CONTAINING FE