Analysis of Ligand-Protein Contacts in PDB entry:
1Y5N


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 1Y5N. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
C
1 10N-FORMYLMETHIONINE
lig 2
MD1
A
1800 47 ESTER GUANYLATE ESTER
lig 3
MD1
A
2800 47 ESTER GUANYLATE ESTER
lig 4
6MO
A
3800 1MOLYBDENUM(VI) ION
lig 5
SF4
A
1801 8IRON/SULFUR CLUSTER
lig 6
SF4
B
1802 8IRON/SULFUR CLUSTER
lig 7
SF4
B
1803 8IRON/SULFUR CLUSTER
lig 8
SF4
B
1804 8IRON/SULFUR CLUSTER
lig 9
F3S
B
1805 7FE3-S4 CLUSTER
lig 10
3PH
B
1806 181,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 11
HEM
C
806 43PROTOPORPHYRIN IX CONTAINING FE
lig 12
HEM
C
807 43PROTOPORPHYRIN IX CONTAINING FE
lig 13
AGA
C
309 30 OCTANOATE
lig 14
PCI
C
808 12PENTACHLOROPHENOL