Analysis of Ligand-Protein Contacts in PDB entry:
1Y8Z


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 1Y8Z. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
5HU
C
7 215-HYDROXYMETHYLURIDINE-2'-DEOXY-5'-MONOPHO
lig 2
CME
A
1014 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 3
CME
A
1274 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 4
CME
B
1014 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 5
CME
B
1274 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 6
NCO
D
3003 7COBALT HEXAMMINE(III)
lig 7
NCO
A
3001 7COBALT HEXAMMINE(III)
lig 8
NCO
A
3005 7COBALT HEXAMMINE(III)
lig 9
UDP
A
3006 25URIDINE-5'-DIPHOSPHATE
lig 10
GOL
A
5001 6GLYCEROL
lig 11
GOL
A
5002 6GLYCEROL
lig 12
GOL
A
5003 6GLYCEROL
lig 13
CL
B
4001 1CHLORIDE ION
lig 14
NCO
B
3002 7COBALT HEXAMMINE(III)
lig 15
NCO
B
3004 7COBALT HEXAMMINE(III)
lig 16
UDP
B
2001 25URIDINE-5'-DIPHOSPHATE
lig 17
GOL
B
5004 6GLYCEROL