Analysis of Ligand-Protein Contacts in PDB entry:
1YAD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 1YAD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SO4
A
291 5SULFATE ION
lig 2
SO4
A
296 5SULFATE ION
lig 3
144
A
300 8TRIS-HYDROXYMETHYL-METHYL-AMMONIUM
lig 4
SO4
B
292 5SULFATE ION
lig 5
SO4
B
295 5SULFATE ION
lig 6
144
B
301 8TRIS-HYDROXYMETHYL-METHYL-AMMONIUM
lig 7
SO4
C
293 5SULFATE ION
lig 8
SO4
C
297 5SULFATE ION
lig 9
SO4
D
294 5SULFATE ION
lig 10
SO4
D
298 5SULFATE ION
lig 11
144
D
302 8TRIS-HYDROXYMETHYL-METHYL-AMMONIUM