Analysis of Ligand-Protein Contacts in PDB entry:
1YBA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 1YBA. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PO4
A
411 5PHOSPHATE ION
lig 2
PO4
A
412 5PHOSPHATE ION
lig 3
AKG
A
413 102-OXOGLUTARIC ACID
lig 4
UNL
A
414 10UNKNOWN LIGAND
lig 5
UNL
A
415 10UNKNOWN LIGAND
lig 6
NAD
A
416 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 7
PO4
B
411 5PHOSPHATE ION
lig 8
AKG
B
412 102-OXOGLUTARIC ACID
lig 9
UNL
B
413 10UNKNOWN LIGAND
lig 10
NAD
B
414 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 11
PO4
C
411 5PHOSPHATE ION
lig 12
AKG
C
412 102-OXOGLUTARIC ACID
lig 13
UNL
C
413 10UNKNOWN LIGAND
lig 14
UNL
C
414 10UNKNOWN LIGAND
lig 15
NAD
C
415 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 16
PO4
D
411 5PHOSPHATE ION
lig 17
AKG
D
412 102-OXOGLUTARIC ACID
lig 18
UNL
D
413 10UNKNOWN LIGAND
lig 19
UNL
D
414 10UNKNOWN LIGAND
lig 20
NAD
D
415 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE