Analysis of Ligand-Protein Contacts in PDB entry:
1YF6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 1YF6. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
BCL
L
852 66BACTERIOCHLOROPHYLL A
lig 2
BCL
L
854 66BACTERIOCHLOROPHYLL A
lig 3
BPH
L
855 51BACTERIOPHEOPHYTIN A
lig 4
U10
L
858 16UBIQUINONE-10
lig 5
U10
L
859 15UBIQUINONE-10
lig 6
HTO
L
863 10HEPTANE-1,2,3-TRIOL
lig 7
LDA
L
864 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 8
LDA
L
865 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 9
GOL
L
869 6GLYCEROL
lig 10
FE2
M
850 1FE (II) ION
lig 11
CL
M
861 1CHLORIDE ION
lig 12
PO4
M
867 5PHOSPHATE ION
lig 13
PO4
M
868 5PHOSPHATE ION
lig 14
BCL
M
851 66BACTERIOCHLOROPHYLL A
lig 15
BCL
M
853 66BACTERIOCHLOROPHYLL A
lig 16
BCL
M
856 66BACTERIOCHLOROPHYLL A
lig 17
U10
M
857 15UBIQUINONE-10
lig 18
SPO
M
860 42SPHEROIDENE
lig 19
CDL
M
862 81CARDIOLIPIN
lig 20
LDA
M
866 11LAURYL DIMETHYLAMINE-N-OXIDE