Analysis of Ligand-Protein Contacts in PDB entry:
1YF8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 1YF8. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
MAN
D
3 11ALPHA-D-MANNOPYRANOSE
lig 6
BMA
D
4 11BETA-D-MANNOPYRANOSE
lig 7
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
MAN
E
3 11ALPHA-D-MANNOPYRANOSE
lig 10
BGC
F
1 12BETA-D-GLUCOPYRANOSE
lig 11
GAL
F
2 11BETA-D-GALACTOPYRANOSE
lig 12
BGC
G
1 12BETA-D-GLUCOPYRANOSE
lig 13
GAL
G
2 11BETA-D-GALACTOPYRANOSE
lig 14
NAG
A
1003 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
P6C
A
1001 172-AMINO-4-ISOPROPYL-PTERIDINE-6-CARBOXYLIC
lig 16
GAL
B
1013 11BETA-D-GALACTOPYRANOSE