Analysis of Ligand-Protein Contacts in PDB entry:
1YGD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 6 ligands in PDB entry 1YGD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ZNH
A
142 43PROTOPORPHYRIN IX CONTAINING ZN
lig 2
HEM
B
147 43PROTOPORPHYRIN IX CONTAINING FE
lig 3
OXY
B
150 2OXYGEN MOLECULE
lig 4
ZNH
C
142 43PROTOPORPHYRIN IX CONTAINING ZN
lig 5
HEM
D
147 43PROTOPORPHYRIN IX CONTAINING FE
lig 6
OXY
D
150 2OXYGEN MOLECULE