Analysis of Ligand-Protein Contacts in PDB entry:
1YKP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 1YKP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CME
B
429 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 2
CME
D
429 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 3
CME
F
429 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 4
CME
H
429 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 5
CME
J
429 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 6
CME
L
429 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 7
DHB
A
550 113,4-DIHYDROXYBENZOIC ACID
lig 8
FE
B
600 1FE (III) ION
lig 9
FE
D
1600 1FE (III) ION
lig 10
DHB
D
1550 113,4-DIHYDROXYBENZOIC ACID
lig 11
FE
F
2600 1FE (III) ION
lig 12
DHB
F
2550 113,4-DIHYDROXYBENZOIC ACID
lig 13
FE
H
3600 1FE (III) ION
lig 14
DHB
H
3550 113,4-DIHYDROXYBENZOIC ACID
lig 15
FE
J
4600 1FE (III) ION
lig 16
DHB
J
4550 113,4-DIHYDROXYBENZOIC ACID
lig 17
FE
L
5600 1FE (III) ION
lig 18
DHB
L
5550 113,4-DIHYDROXYBENZOIC ACID