Analysis of Ligand-Protein Contacts in PDB entry:
1YM0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 1YM0. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PCA
B
1 8PYROGLUTAMIC ACID
lig 2
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
MAN
C
3 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 6
FUC
C
5 10ALPHA-L-FUCOPYRANOSE
lig 7
FUC
C
6 10ALPHA-L-FUCOPYRANOSE
lig 8
MG
A
401 1MAGNESIUM ION
lig 9
MG
A
402 1MAGNESIUM ION
lig 10
MG
A
403 1MAGNESIUM ION
lig 11
SO4
A
501 5SULFATE ION
lig 12
SO4
A
502 5SULFATE ION