Analysis of Ligand-Protein Contacts in PDB entry:
1YM2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 9 ligands in PDB entry 1YM2. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACE
X
1 3ACETYL GROUP
lig 2
24O
X
4 16 OXOCYCLOPENTANECARBOXYLIC ACID
lig 3
LYT
X
6 5BUTYLAMINE
lig 4
ACE
Y
1 3ACETYL GROUP
lig 5
24O
Y
4 16 OXOCYCLOPENTANECARBOXYLIC ACID
lig 6
LYT
Y
6 5BUTYLAMINE
lig 7
ACE
Z
1 3ACETYL GROUP
lig 8
24O
Z
4 16 OXOCYCLOPENTANECARBOXYLIC ACID
lig 9
LYT
Z
6 5BUTYLAMINE