Analysis of Ligand-Protein Contacts in PDB entry:
1YNQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 1YNQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GLC
C
1 11ALPHA-D-GLUCOPYRANOSE
lig 2
FRU
C
2 12BETA-D-FRUCTOFURANOSE
lig 3
NA
A
299 1SODIUM ION
lig 4
SO4
A
300 5SULFATE ION
lig 5
SO4
A
301 5SULFATE ION
lig 6
SO4
A
302 5SULFATE ION
lig 7
SO4
A
303 5SULFATE ION
lig 8
SO4
A
304 5SULFATE ION
lig 9
SO4
A
305 5SULFATE ION
lig 10
SO4
A
306 5SULFATE ION
lig 11
SO4
A
307 5SULFATE ION
lig 12
SO4
B
298 5SULFATE ION
lig 13
SO4
B
299 5SULFATE ION
lig 14
SO4
B
300 5SULFATE ION
lig 15
NDP
B
301 48 PHOSPHATE
lig 16
GOL
B
302 6GLYCEROL
lig 17
GOL
B
303 6GLYCEROL
lig 18
GOL
B
304 6GLYCEROL