Analysis of Ligand-Protein Contacts in PDB entry:
1YP4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 1YP4. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SO4
A
1000 5SULFATE ION
lig 2
SO4
A
1007 5SULFATE ION
lig 3
SO4
A
1008 5SULFATE ION
lig 4
SO4
A
1020 5SULFATE ION
lig 5
ADP
A
557 27ADENOSINE-5'-DIPHOSPHATE
lig 6
SO4
B
1001 5SULFATE ION
lig 7
SO4
B
1006 5SULFATE ION
lig 8
SO4
B
1009 5SULFATE ION
lig 9
SO4
B
1021 5SULFATE ION
lig 10
ADQ
B
506 38ADENOSINE-5'-DIPHOSPHATE-GLUCOSE
lig 11
SO4
C
1002 5SULFATE ION
lig 12
SO4
C
1005 5SULFATE ION
lig 13
SO4
C
1010 5SULFATE ION
lig 14
SO4
C
1022 5SULFATE ION
lig 15
ADP
C
558 27ADENOSINE-5'-DIPHOSPHATE
lig 16
SO4
D
1003 5SULFATE ION
lig 17
SO4
D
1004 5SULFATE ION
lig 18
SO4
D
1011 5SULFATE ION
lig 19
SO4
D
1023 5SULFATE ION