Analysis of Ligand-Protein Contacts in PDB entry:
1YQ2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 41 ligands in PDB entry 1YQ2. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MG
A
7001 1MAGNESIUM ION
lig 2
NA
A
7501 1SODIUM ION
lig 3
NA
A
7511 1SODIUM ION
lig 4
CL
A
8011 1CHLORIDE ION
lig 5
SO4
A
8501 5SULFATE ION
lig 6
SO4
A
8511 5SULFATE ION
lig 7
PEG
A
9001 7DI(HYDROXYETHYL)ETHER
lig 8
MG
B
7002 1MAGNESIUM ION
lig 9
NA
B
7502 1SODIUM ION
lig 10
NA
B
7512 1SODIUM ION
lig 11
CL
B
8012 1CHLORIDE ION
lig 12
SO4
B
8502 5SULFATE ION
lig 13
SO4
B
8512 5SULFATE ION
lig 14
PEG
B
9002 7DI(HYDROXYETHYL)ETHER
lig 15
MG
C
7003 1MAGNESIUM ION
lig 16
NA
C
7503 1SODIUM ION
lig 17
NA
C
7513 1SODIUM ION
lig 18
CL
C
8013 1CHLORIDE ION
lig 19
SO4
C
8513 5SULFATE ION
lig 20
PEG
C
9003 7DI(HYDROXYETHYL)ETHER
lig 21
MG
D
7004 1MAGNESIUM ION
lig 22
NA
D
7504 1SODIUM ION
lig 23
NA
D
7514 1SODIUM ION
lig 24
CL
D
8014 1CHLORIDE ION
lig 25
SO4
D
8504 5SULFATE ION
lig 26
SO4
D
8514 5SULFATE ION
lig 27
PEG
D
9004 7DI(HYDROXYETHYL)ETHER
lig 28
MG
E
7005 1MAGNESIUM ION
lig 29
NA
E
7505 1SODIUM ION
lig 30
NA
E
7515 1SODIUM ION
lig 31
CL
E
8015 1CHLORIDE ION
lig 32
SO4
E
8505 5SULFATE ION
lig 33
SO4
E
8515 5SULFATE ION
lig 34
PEG
E
9005 7DI(HYDROXYETHYL)ETHER
lig 35
MG
F
7006 1MAGNESIUM ION
lig 36
NA
F
7506 1SODIUM ION
lig 37
NA
F
7516 1SODIUM ION
lig 38
CL
F
8016 1CHLORIDE ION
lig 39
SO4
F
8506 5SULFATE ION
lig 40
SO4
F
8516 5SULFATE ION
lig 41
PEG
F
9006 7DI(HYDROXYETHYL)ETHER