Analysis of Ligand-Protein Contacts in PDB entry:
1YQ3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 41 ligands in PDB entry 1YQ3. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FAD
A
1001 53FLAVIN-ADENINE DINUCLEOTIDE
lig 2
TEO
A
1002 9MALATE LIKE INTERMEDIATE
lig 3
UNL
A
1003 1UNKNOWN LIGAND
lig 4
UNL
A
1004 1UNKNOWN LIGAND
lig 5
UNL
A
1005 1UNKNOWN LIGAND
lig 6
UNL
A
1006 1UNKNOWN LIGAND
lig 7
UNL
A
1007 1UNKNOWN LIGAND
lig 8
UNL
A
1008 1UNKNOWN LIGAND
lig 9
UNL
A
1009 1UNKNOWN LIGAND
lig 10
UNL
A
1010 1UNKNOWN LIGAND
lig 11
UNL
A
1011 1UNKNOWN LIGAND
lig 12
UNL
A
1012 1UNKNOWN LIGAND
lig 13
UNL
A
1013 1UNKNOWN LIGAND
lig 14
UNL
A
1014 1UNKNOWN LIGAND
lig 15
UNL
A
1015 1UNKNOWN LIGAND
lig 16
UNL
A
1016 1UNKNOWN LIGAND
lig 17
UNL
A
1017 1UNKNOWN LIGAND
lig 18
FES
B
1002 4FE2/S2 (INORGANIC) CLUSTER
lig 19
SF4
B
1003 8IRON/SULFUR CLUSTER
lig 20
F3S
B
1004 7FE3-S4 CLUSTER
lig 21
UQ
B
1005 14COENZYME Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-
lig 22
UNL
B
1006 1UNKNOWN LIGAND
lig 23
UNL
B
1007 1UNKNOWN LIGAND
lig 24
UNL
B
1008 1UNKNOWN LIGAND
lig 25
UNL
B
1009 1UNKNOWN LIGAND
lig 26
UNL
B
1010 1UNKNOWN LIGAND
lig 27
UNL
B
1011 1UNKNOWN LIGAND
lig 28
GOL
B
1012 6GLYCEROL
lig 29
JZR
C
142 18HEXYL BETA-D-GLUCOPYRANOSIDE
lig 30
HEM
C
143 41PROTOPORPHYRIN IX CONTAINING FE
lig 31
PEE
C
144 211,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 32
UNL
C
203 1UNKNOWN LIGAND
lig 33
UNL
C
211 1UNKNOWN LIGAND
lig 34
UNL
C
212 1UNKNOWN LIGAND
lig 35
UNL
C
226 1UNKNOWN LIGAND
lig 36
PEE
D
104 241,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 37
UNL
D
204 1UNKNOWN LIGAND
lig 38
UNL
D
205 1UNKNOWN LIGAND
lig 39
UNL
D
209 1UNKNOWN LIGAND
lig 40
UNL
D
218 1UNKNOWN LIGAND
lig 41
UNL
D
228 1UNKNOWN LIGAND